2024
3 projects
Development of use case tutorials for Bioframe
The BioFrame Python library is a powerful tool designed for operations and analysis of genomic intervals, enabling users to effortlessly load genomic...
Rust-based acceleration of bioframe using polars and a new API to access assembly metadata
This project aims to enhance the bioframe library developed by Open2C, an organization that creates software for analyzing genomic data. A key focus...
Developing a binary pair format
Problem: Storing Hi-C contacts in a gzipped .tsv format, which is mainly used in pairtools, cause major slowdowns for computations and storing....