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Science and medicine

Neuroinformatics Unit

Open-source tools for neuroscience and ML

data sciencedeep learningmachine learningnaparinumpypythonpytorchscipy
Organization website

Participation history

2 GSoC years

20262025

2026

3 projects

Official year page

Napari-GUI for manual tracklets refinement

This project aims to develop a napari-based GUI for interactive correction of pose-estimation tracks within the movement framework. It will enable...

Project page

brainglobe-cellfinder: expand input support to 2.5D and single-channel data (Soumya Snigdha Kundu)

Cellfinder currently expects full 3D whole-brain volumes with both signal and background channels, so brain slices (2.5D) and single-channel...

Project page

BrainGlobe: Miscellaneous maintenance work on BrainGlobe overall infrastructure (Varun)

This proposal aims to improve the infrastructure of the BrainGlobe ecosystem and make it easier to maintain and contribute to as it continues to...

Project page

2025

2 projects

Official year page

BrainGlobe: Automating Region Selection in brainglobe-registration

Synopsis: This project aims to enhance the brainglobe-registration tool by automating the selection of atlas regions for aligning 2D or 3D brain...

CodeProject page

Datashuttle: Allow Google Drive or AWS as remote storage (Shrey)

This is a proposal to extend Datashuttle's functionality to allow connections to Google Drive and AWS buckets as remote storage options. This project...

CodeProject page