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Department of Biomedical Informatics, Emory University

Biomedical research to advance healthcare

dicomjavajavascriptpythoncolabshell

Organization website

Participation history

5 GSoC years

2025 2024 2023 2022 2021

2025

3 projects

Official year page

Securing Linux Storage with ACLs: Open-Source Web Management Interface for Enhanced Data Protection

Institutional departments, such as the Biomedical Informatics (BMI) Department of Emory University School of Medicine, manage vast amounts of data,...

Code Project page

Adaptive Closed-Loop Neuromodulation: An Agentic Framework Using Synthetic EEG Data

This project focused on developing ACUMEN (Active Cross-Entropy Method with Uncertainty-driven Neural ODEs), a data-efficient framework for system...

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Leveraging Diffusion Models to Enhance Segmentation Models for GI Tract Disorder Evaluation

Acquiring neural fMRI and abdominal MRI data is inherently expensive and time-consuming, significantly limiting the volume of datasets available for...

Code Project page

2024

5 projects

Official year page

A Framework for Unsupervised Deep Clustering

Not only can clustering in itself be a useful task to solve, features learnt from deep clustering algorithms can also be used in downstream tasks...

Code Project page

A GUI of Foundational Model Toolbox for Image Segmentation

This proposal highlights some key points and expected results of the project. The project proposes developing an open-source Graphical User Interface...

Code Project page

Development of an Open-Source EEG Foundation Model

The project's core objective is to develop an open-source foundational model for EEG data analysis, using deep learning techniques and extensive...

Code Project page

Development of a Graphical User Interface for Time Series Toolbox Using Deep Learning

Time series data has wide application across numerous sectors including healthcare, finance, and environmental studies, offering profound insights...

Code Project page

Python Expansion of the Open Source Electrophysiological Toolbox

This project aims to enhance the Open Source Electrophysiological Toolbox (OSET) by expanding its Python capabilities. The goal is to create a...

Code Project page

2023

5 projects

Official year page

A Methodology To Categorize Exam Series

DICOM is the global standard for managing and exchanging medical images and data but lacks a consistent series-naming scheme. I will use machine...

Code Project page

Develop a drag-and-drop GUI for deep learning experimentation

The aim is to develop a desktop application (GUI) that allows users to run their Deep Learning experiments that is integrated with PyTorch library...

Code Project page

Developing Contribute Action

Concore is a lightweight framework for closed-loop peripheral neuromodulation control systems. Control-editor is a React-based frontend environment...

Code Project page

An Integrated CONTROL-CORE experience

At present, all the Concore methods such as build, debug, run etc. are executed from CLI by user and Concore-editor does not serve the functionality...

Code Project page

A real-time computing support for concore.

To achieve real-time execution in Concore, one approach is to optimize the existing codebase. However, implementing the system with straightforward...

Code Project page

2022

8 projects

Official year page

A server environment for the concore framework

This program incorporates server-based deployment workflow files to the server in a secure manner. It allows composing the workflows, aware of the...

Code Project page

Better representations of scanner utilization from DICOM metadata

Niffler enables computing scanner utilization using real-time DICOM metadata extraction. Niffler acquires images from the PACS in real-time...

Code Project page

MRIQC- Automated analysis of weekly MRI Quality Control Images for ACR Accreditation

The aim of this project is to automatically detect the key features of MRI phantom images and use those features to determine the state of the...

Code Project page

Adopt DHGWorkflow for concore with a seamless integration

Concore is a framework for closed-Loop peripheral neuromodulation control systems. The CONTROL-CORE protocol, known as concore, allows modular...

Code Project page

A Python based tool for viewing and basic analysis of files with NumPy format

The project is an open-source Python package for loading, analysis, and visualization of electrophysiological data. The package will enable users to...

Code Project page

Interactive Multidimensional Visualizations for Eaglescope

Eaglescaope is a framework for creating interactive visualizations and selection dashboards without coding. This project aims to expand upon the...

Code Project page

Workflow module for Niffler framework

Niffler provides various modules to handle different DICOM related tasks. Some of the modules are to be executed sequentially by the user to get the...

Code Project page

Extending the Graphical User Interface for OpenAI Gym

This proposal aims to extend VisualRLComposer, a GUI for OpenAI Gym. The project will be extended by adding: multi environment experimentation which...

Code Project page

2021

6 projects

Official year page

CovCT: Development of an AI-based Android Application for distinguishing COVID-19 and Pneumonia using Computed Tomography Images and generate reports for analysis

Development of an AI-based Android Application for distinguishing COVID-19 and Pneumonia using Computed Tomography Images.The project aims at...

Code Project page

A Frontend For Loopsim Framework To Model Workflows With Closed Loops

LoopSim framework aims to facilitate workflows with loops i.e workflows without specific start and end services. LoopSim requires an interface to...

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A frontend for Niffler DICOM framework for machine learning pipelines and processing workflows

This project aims to develop a potential frontend for Niffler. Niffler is currently a command-line tool where the user has to download it in their...

Code Project page

Graphical User Interface for OpenAI Gym

The project is aiming to develop a GUI for the simulations of reinforcement learning so that users, particularly, the researchers can be able to test...

Code Project page

Tensorflow GUI

Tensorflow GUI will help everyone from beginners to professionals in their day to day work. People who are new to the field of deep learning can use...

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A Testing Framework for Niffler DICOM frameworks for Continuous Integration

This Project aims to develop unit and integration tests for the Niffler modules and implement automated testing using Continuous Integration. The...

Code Project page